U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX8552712: Whole-exome data of Lepus mandshuricus
1 ILLUMINA (Illumina HiSeq 1500) run: 6.2M spots, 1.6G bases, 480.3Mb downloads

Design: Whole-exome sequencing data obtained from a targeted capture approach.
Submitted by: CIBIO, University of Porto
Study: Whole-exome data from 15 hare species (genus Lepus spp.) species and pygmy rabbit (Brachylagus idahoensis). Raw sequence reads
show Abstracthide Abstract
Whole-exome data used for phylogenomic analyses of the hare (Lepus spp.) radiation. This study had the aim of clarifying the evolutionary history of hares and the contribution of long-term hybridization in the genus to modern standing levels of genetic variation and local adaptation. We produced whole-exome data for 30 specimens across 15 hare species and 2 pygmy rabbit specimens.
Sample:
SAMN15224433 • SRS6846612 • All experiments • All runs
Library:
Name: LMS_PRI_2460
Instrument: Illumina HiSeq 1500
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 6.2M spots, 1.6G bases, 480.3Mb
Run# of Spots# of BasesSizePublished
SRR120204976,181,5311.6G480.3Mb2021-05-02

ID:
11113005

Supplemental Content

Recent activity

  • Tursiops truncatus isolate Ttr_PE1 tRNA-Asp gene, partial sequence; cytochrome c...
    Tursiops truncatus isolate Ttr_PE1 tRNA-Asp gene, partial sequence; cytochrome c oxidase subunit II (COII) gene, complete cds; and tRNA-Lys gene, partial sequence; mitochondrial
    gi|1102133372|gb|KU992252.1|
    Nucleotide
  • Rattus norvegicus PSMC3 interacting protein (Psmc3ip), mRNA
    Rattus norvegicus PSMC3 interacting protein (Psmc3ip), mRNA
    gi|77628026|ref|NM_134458.2|
    Nucleotide
  • Bicuspid
    Bicuspid
    One of the eight permanent teeth, two on either side in each jaw, between the canines (CUSPID) and the molars (MOLAR), serving for grinding and crushing food. The upper have t...<br/>Year introduced: 1965
    MeSH
  • Periapical Tissue
    Periapical Tissue
    Tissue surrounding the apex of a tooth, including the apical portion of the periodontal membrane and alveolar bone.<br/>Year introduced: 1973(1972)
    MeSH
  • Tooth Crown
    Tooth Crown
    The upper part of the tooth, which joins the lower part of the tooth (TOOTH ROOT) at the cervix (TOOTH CERVIX) at a line called the cementoenamel junction. The entire surface ...<br/>Year introduced: 1997
    MeSH

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...